You are viewing the site in preview mode

Skip to main content

Table 5 Parameter values of the simulations

From: Scalable linkage-disequilibrium-based selective sweep detection: a performance guide

Demographic model Beginning time of bottleneck Ending time of bottleneck Relative population size during bottleneck Relative population size after bottleneck
constant model NA NA NA NA
bottleneck1 0.100 0.1004 0.5 1.0
bottleneck2 0.015 0.0160 0.5 1.0
bottleneck3 0.015 0.0170 0.01 1.0
bottleneck4 0.015 0.0160 0.005 1.0
bottleneck5 0.015 0.0170 0.1 1.0
bottleneck6 0.010 0.0104 0.5 1
bottleneck7 0.010 0.0104 0.1 1
  1. Time is measured backwards, from the present to the past. Thus, the ‘beginning’ of the bottleneck is the most recent time point that the population size changes. Forward in time, it corresponds to the ‘end’ of the bottleneck